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Rosellinia necatrix infection induces differential gene expression between tolerant and susceptible avocado rootstocks.

Identifieur interne : 000391 ( Main/Exploration ); précédent : 000390; suivant : 000392

Rosellinia necatrix infection induces differential gene expression between tolerant and susceptible avocado rootstocks.

Auteurs : Adela Zumaquero [Espagne] ; Elsa Martínez-Ferri [Espagne] ; Antonio J. Matas [Espagne] ; Bianca Reeksting [Afrique du Sud] ; Nicholas A. Olivier [Afrique du Sud] ; Fernando Pliego-Alfaro [Espagne] ; Araceli Barcel [Espagne] ; Nöelani Van Den Berg [Afrique du Sud] ; Clara Pliego [Espagne]

Source :

RBID : pubmed:30763398

Descripteurs français

English descriptors

Abstract

Rosellinia necatrix is the causal agent of avocado white root rot (WRR). Control of this soil-borne disease is difficult, and the use of tolerant rootstocks may present an effective method to lessen its impact. To date, no studies on the molecular mechanisms regulating the avocado plant response towards this pathogen have been undertaken. To shed light on the mechanisms underpinning disease susceptibility and tolerance, molecular analysis of the gene's response in two avocado rootstocks with a contrasting disease reaction was assessed. Gene expression profiles against R. necatrix were carried out in the susceptible 'Dusa' and the tolerant selection BG83 avocado genotypes by micro-array analysis. In 'Dusa', the early response was mainly related to redox processes and cell-wall degradation activities, all becoming enhanced after disease progression affected photosynthetic capacity, whereas tolerance to R. necatrix in BG83 relied on the induction of protease inhibitors and their negative regulators, as well as genes related to tolerance to salt and osmotic stress such as aspartic peptidase domain-containing proteins and gdsl esterase lipase proteins. In addition, three protease inhibitors were identified, glu protease, trypsin and endopeptidase inhibitors, which were highly overexpressed in the tolerant genotype when compared to susceptible 'Dusa', after infection with R. necatrix, reaching fold change values of 52, 19 and 38, respectively. The contrasting results between 'Dusa' and BG83 provide new insights into the different mechanisms involved in avocado tolerance to Phytophthora cinnamomi and R. necatrix, which are consistent with their biotrophic and necrotrophic lifestyles, respectively. The differential induction of genes involved in salt and osmotic stress in BG83 could indicate that R. necatrix penetration into the roots is associated with osmotic effects, suggesting that BG83's tolerance to R. necatrix is related to the ability to withstand osmotic imbalance. In addition, the high expression of protease inhibitors in tolerant BG83 compared to susceptible 'Dusa' after infection with the pathogen suggests the important role that these proteins may play in the defence of avocado rootstocks against R. necatrix.

DOI: 10.1371/journal.pone.0212359
PubMed: 30763398
PubMed Central: PMC6375617


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<nlm:affiliation>Department of Crop Ecophysiology, Fruticultura Subtropical y Mediterránea (IFAPA) Unidad Asociada de I+D+i al CSIC, Málaga, Spain.</nlm:affiliation>
<country xml:lang="fr">Espagne</country>
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<name sortKey="Pliego Alfaro, Fernando" sort="Pliego Alfaro, Fernando" uniqKey="Pliego Alfaro F" first="Fernando" last="Pliego-Alfaro">Fernando Pliego-Alfaro</name>
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<nlm:affiliation>Department of Plant Physiology, Instituto de Hortofruticultura Subtropical y Mediterránea "La Mayora" (IHSM-UMA-CSIC), Unidad Asociada IHSM-IFAPA, University of Malaga, Málaga, Spain.</nlm:affiliation>
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<country xml:lang="fr">Espagne</country>
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<nlm:affiliation>Department of Biochemistry, Genetics and Microbiology, University of Pretoria, Pretoria, South Africa.</nlm:affiliation>
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<term>Cluster Analysis (MeSH)</term>
<term>Disease Resistance (genetics)</term>
<term>Gene Expression Regulation, Plant (MeSH)</term>
<term>Genotype (MeSH)</term>
<term>Persea (genetics)</term>
<term>Persea (metabolism)</term>
<term>Persea (microbiology)</term>
<term>Phytophthora (physiology)</term>
<term>Plant Diseases (genetics)</term>
<term>Plant Diseases (microbiology)</term>
<term>Plant Roots (genetics)</term>
<term>Plant Roots (metabolism)</term>
<term>Plant Roots (microbiology)</term>
<term>Principal Component Analysis (MeSH)</term>
<term>Protease Inhibitors (metabolism)</term>
<term>Xylariales (physiology)</term>
</keywords>
<keywords scheme="KwdFr" xml:lang="fr">
<term>Analyse de regroupements (MeSH)</term>
<term>Analyse en composantes principales (MeSH)</term>
<term>Génotype (MeSH)</term>
<term>Inhibiteurs de protéases (métabolisme)</term>
<term>Maladies des plantes (génétique)</term>
<term>Maladies des plantes (microbiologie)</term>
<term>Persea (génétique)</term>
<term>Persea (microbiologie)</term>
<term>Persea (métabolisme)</term>
<term>Phytophthora (physiologie)</term>
<term>Racines de plante (génétique)</term>
<term>Racines de plante (microbiologie)</term>
<term>Racines de plante (métabolisme)</term>
<term>Régulation de l'expression des gènes végétaux (MeSH)</term>
<term>Résistance à la maladie (génétique)</term>
<term>Xylariales (physiologie)</term>
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<keywords scheme="MESH" type="chemical" qualifier="metabolism" xml:lang="en">
<term>Protease Inhibitors</term>
</keywords>
<keywords scheme="MESH" qualifier="genetics" xml:lang="en">
<term>Disease Resistance</term>
<term>Persea</term>
<term>Plant Diseases</term>
<term>Plant Roots</term>
</keywords>
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<term>Maladies des plantes</term>
<term>Persea</term>
<term>Racines de plante</term>
<term>Résistance à la maladie</term>
</keywords>
<keywords scheme="MESH" qualifier="metabolism" xml:lang="en">
<term>Persea</term>
<term>Plant Roots</term>
</keywords>
<keywords scheme="MESH" qualifier="microbiologie" xml:lang="fr">
<term>Maladies des plantes</term>
<term>Persea</term>
<term>Racines de plante</term>
</keywords>
<keywords scheme="MESH" qualifier="microbiology" xml:lang="en">
<term>Persea</term>
<term>Plant Diseases</term>
<term>Plant Roots</term>
</keywords>
<keywords scheme="MESH" qualifier="métabolisme" xml:lang="fr">
<term>Inhibiteurs de protéases</term>
<term>Persea</term>
<term>Racines de plante</term>
</keywords>
<keywords scheme="MESH" qualifier="physiologie" xml:lang="fr">
<term>Phytophthora</term>
<term>Xylariales</term>
</keywords>
<keywords scheme="MESH" qualifier="physiology" xml:lang="en">
<term>Phytophthora</term>
<term>Xylariales</term>
</keywords>
<keywords scheme="MESH" xml:lang="en">
<term>Cluster Analysis</term>
<term>Gene Expression Regulation, Plant</term>
<term>Genotype</term>
<term>Principal Component Analysis</term>
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<term>Analyse de regroupements</term>
<term>Analyse en composantes principales</term>
<term>Génotype</term>
<term>Régulation de l'expression des gènes végétaux</term>
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<div type="abstract" xml:lang="en">Rosellinia necatrix is the causal agent of avocado white root rot (WRR). Control of this soil-borne disease is difficult, and the use of tolerant rootstocks may present an effective method to lessen its impact. To date, no studies on the molecular mechanisms regulating the avocado plant response towards this pathogen have been undertaken. To shed light on the mechanisms underpinning disease susceptibility and tolerance, molecular analysis of the gene's response in two avocado rootstocks with a contrasting disease reaction was assessed. Gene expression profiles against R. necatrix were carried out in the susceptible 'Dusa' and the tolerant selection BG83 avocado genotypes by micro-array analysis. In 'Dusa', the early response was mainly related to redox processes and cell-wall degradation activities, all becoming enhanced after disease progression affected photosynthetic capacity, whereas tolerance to R. necatrix in BG83 relied on the induction of protease inhibitors and their negative regulators, as well as genes related to tolerance to salt and osmotic stress such as aspartic peptidase domain-containing proteins and gdsl esterase lipase proteins. In addition, three protease inhibitors were identified, glu protease, trypsin and endopeptidase inhibitors, which were highly overexpressed in the tolerant genotype when compared to susceptible 'Dusa', after infection with R. necatrix, reaching fold change values of 52, 19 and 38, respectively. The contrasting results between 'Dusa' and BG83 provide new insights into the different mechanisms involved in avocado tolerance to Phytophthora cinnamomi and R. necatrix, which are consistent with their biotrophic and necrotrophic lifestyles, respectively. The differential induction of genes involved in salt and osmotic stress in BG83 could indicate that R. necatrix penetration into the roots is associated with osmotic effects, suggesting that BG83's tolerance to R. necatrix is related to the ability to withstand osmotic imbalance. In addition, the high expression of protease inhibitors in tolerant BG83 compared to susceptible 'Dusa' after infection with the pathogen suggests the important role that these proteins may play in the defence of avocado rootstocks against R. necatrix.</div>
</front>
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<Day>20</Day>
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<DateRevised>
<Year>2020</Year>
<Month>03</Month>
<Day>09</Day>
</DateRevised>
<Article PubModel="Electronic-eCollection">
<Journal>
<ISSN IssnType="Electronic">1932-6203</ISSN>
<JournalIssue CitedMedium="Internet">
<Volume>14</Volume>
<Issue>2</Issue>
<PubDate>
<Year>2019</Year>
</PubDate>
</JournalIssue>
<Title>PloS one</Title>
<ISOAbbreviation>PLoS One</ISOAbbreviation>
</Journal>
<ArticleTitle>Rosellinia necatrix infection induces differential gene expression between tolerant and susceptible avocado rootstocks.</ArticleTitle>
<Pagination>
<MedlinePgn>e0212359</MedlinePgn>
</Pagination>
<ELocationID EIdType="doi" ValidYN="Y">10.1371/journal.pone.0212359</ELocationID>
<Abstract>
<AbstractText>Rosellinia necatrix is the causal agent of avocado white root rot (WRR). Control of this soil-borne disease is difficult, and the use of tolerant rootstocks may present an effective method to lessen its impact. To date, no studies on the molecular mechanisms regulating the avocado plant response towards this pathogen have been undertaken. To shed light on the mechanisms underpinning disease susceptibility and tolerance, molecular analysis of the gene's response in two avocado rootstocks with a contrasting disease reaction was assessed. Gene expression profiles against R. necatrix were carried out in the susceptible 'Dusa' and the tolerant selection BG83 avocado genotypes by micro-array analysis. In 'Dusa', the early response was mainly related to redox processes and cell-wall degradation activities, all becoming enhanced after disease progression affected photosynthetic capacity, whereas tolerance to R. necatrix in BG83 relied on the induction of protease inhibitors and their negative regulators, as well as genes related to tolerance to salt and osmotic stress such as aspartic peptidase domain-containing proteins and gdsl esterase lipase proteins. In addition, three protease inhibitors were identified, glu protease, trypsin and endopeptidase inhibitors, which were highly overexpressed in the tolerant genotype when compared to susceptible 'Dusa', after infection with R. necatrix, reaching fold change values of 52, 19 and 38, respectively. The contrasting results between 'Dusa' and BG83 provide new insights into the different mechanisms involved in avocado tolerance to Phytophthora cinnamomi and R. necatrix, which are consistent with their biotrophic and necrotrophic lifestyles, respectively. The differential induction of genes involved in salt and osmotic stress in BG83 could indicate that R. necatrix penetration into the roots is associated with osmotic effects, suggesting that BG83's tolerance to R. necatrix is related to the ability to withstand osmotic imbalance. In addition, the high expression of protease inhibitors in tolerant BG83 compared to susceptible 'Dusa' after infection with the pathogen suggests the important role that these proteins may play in the defence of avocado rootstocks against R. necatrix.</AbstractText>
</Abstract>
<AuthorList CompleteYN="Y">
<Author ValidYN="Y">
<LastName>Zumaquero</LastName>
<ForeName>Adela</ForeName>
<Initials>A</Initials>
<AffiliationInfo>
<Affiliation>Department of Genomics and Biotechnology, Fruticultura Subtropical y Mediterránea (IFAPA) Unidad Asociada de I+D+i al CSIC, Málaga, Spain.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y">
<LastName>Martínez-Ferri</LastName>
<ForeName>Elsa</ForeName>
<Initials>E</Initials>
<AffiliationInfo>
<Affiliation>Department of Crop Ecophysiology, Fruticultura Subtropical y Mediterránea (IFAPA) Unidad Asociada de I+D+i al CSIC, Málaga, Spain.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y">
<LastName>Matas</LastName>
<ForeName>Antonio J</ForeName>
<Initials>AJ</Initials>
<AffiliationInfo>
<Affiliation>Department of Plant Physiology, Instituto de Hortofruticultura Subtropical y Mediterránea "La Mayora" (IHSM-UMA-CSIC), Unidad Asociada IHSM-IFAPA, University of Malaga, Málaga, Spain.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y">
<LastName>Reeksting</LastName>
<ForeName>Bianca</ForeName>
<Initials>B</Initials>
<AffiliationInfo>
<Affiliation>Department of Biochemistry, Genetics and Microbiology, University of Pretoria, Pretoria, South Africa.</Affiliation>
</AffiliationInfo>
<AffiliationInfo>
<Affiliation>Forestry and Agricultural Biotechnology Institute (FABI), University of Pretoria, Pretoria, South Africa.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y">
<LastName>Olivier</LastName>
<ForeName>Nicholas A</ForeName>
<Initials>NA</Initials>
<AffiliationInfo>
<Affiliation>Forestry and Agricultural Biotechnology Institute (FABI), University of Pretoria, Pretoria, South Africa.</Affiliation>
</AffiliationInfo>
<AffiliationInfo>
<Affiliation>Department of Plant and Soil Science, University of Pretoria, Pretoria, South Africa.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y">
<LastName>Pliego-Alfaro</LastName>
<ForeName>Fernando</ForeName>
<Initials>F</Initials>
<AffiliationInfo>
<Affiliation>Department of Plant Physiology, Instituto de Hortofruticultura Subtropical y Mediterránea "La Mayora" (IHSM-UMA-CSIC), Unidad Asociada IHSM-IFAPA, University of Malaga, Málaga, Spain.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y">
<LastName>Barceló</LastName>
<ForeName>Araceli</ForeName>
<Initials>A</Initials>
<AffiliationInfo>
<Affiliation>Department of Genomics and Biotechnology, Fruticultura Subtropical y Mediterránea (IFAPA) Unidad Asociada de I+D+i al CSIC, Málaga, Spain.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y">
<LastName>van den Berg</LastName>
<ForeName>Nöelani</ForeName>
<Initials>N</Initials>
<AffiliationInfo>
<Affiliation>Department of Biochemistry, Genetics and Microbiology, University of Pretoria, Pretoria, South Africa.</Affiliation>
</AffiliationInfo>
<AffiliationInfo>
<Affiliation>Forestry and Agricultural Biotechnology Institute (FABI), University of Pretoria, Pretoria, South Africa.</Affiliation>
</AffiliationInfo>
</Author>
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<LastName>Pliego</LastName>
<ForeName>Clara</ForeName>
<Initials>C</Initials>
<Identifier Source="ORCID">0000-0003-1203-6740</Identifier>
<AffiliationInfo>
<Affiliation>Department of Genomics and Biotechnology, Fruticultura Subtropical y Mediterránea (IFAPA) Unidad Asociada de I+D+i al CSIC, Málaga, Spain.</Affiliation>
</AffiliationInfo>
</Author>
</AuthorList>
<Language>eng</Language>
<PublicationTypeList>
<PublicationType UI="D016428">Journal Article</PublicationType>
<PublicationType UI="D013485">Research Support, Non-U.S. Gov't</PublicationType>
</PublicationTypeList>
<ArticleDate DateType="Electronic">
<Year>2019</Year>
<Month>02</Month>
<Day>14</Day>
</ArticleDate>
</Article>
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<Country>United States</Country>
<MedlineTA>PLoS One</MedlineTA>
<NlmUniqueID>101285081</NlmUniqueID>
<ISSNLinking>1932-6203</ISSNLinking>
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<ChemicalList>
<Chemical>
<RegistryNumber>0</RegistryNumber>
<NameOfSubstance UI="D011480">Protease Inhibitors</NameOfSubstance>
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<MeshHeading>
<DescriptorName UI="D016000" MajorTopicYN="N">Cluster Analysis</DescriptorName>
</MeshHeading>
<MeshHeading>
<DescriptorName UI="D060467" MajorTopicYN="N">Disease Resistance</DescriptorName>
<QualifierName UI="Q000235" MajorTopicYN="Y">genetics</QualifierName>
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<MeshHeading>
<DescriptorName UI="D018506" MajorTopicYN="N">Gene Expression Regulation, Plant</DescriptorName>
</MeshHeading>
<MeshHeading>
<DescriptorName UI="D005838" MajorTopicYN="N">Genotype</DescriptorName>
</MeshHeading>
<MeshHeading>
<DescriptorName UI="D027421" MajorTopicYN="N">Persea</DescriptorName>
<QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName>
<QualifierName UI="Q000378" MajorTopicYN="Y">metabolism</QualifierName>
<QualifierName UI="Q000382" MajorTopicYN="N">microbiology</QualifierName>
</MeshHeading>
<MeshHeading>
<DescriptorName UI="D010838" MajorTopicYN="N">Phytophthora</DescriptorName>
<QualifierName UI="Q000502" MajorTopicYN="N">physiology</QualifierName>
</MeshHeading>
<MeshHeading>
<DescriptorName UI="D010935" MajorTopicYN="N">Plant Diseases</DescriptorName>
<QualifierName UI="Q000235" MajorTopicYN="Y">genetics</QualifierName>
<QualifierName UI="Q000382" MajorTopicYN="N">microbiology</QualifierName>
</MeshHeading>
<MeshHeading>
<DescriptorName UI="D018517" MajorTopicYN="N">Plant Roots</DescriptorName>
<QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName>
<QualifierName UI="Q000378" MajorTopicYN="N">metabolism</QualifierName>
<QualifierName UI="Q000382" MajorTopicYN="N">microbiology</QualifierName>
</MeshHeading>
<MeshHeading>
<DescriptorName UI="D025341" MajorTopicYN="N">Principal Component Analysis</DescriptorName>
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<CoiStatement>The authors have declared that no competing interests exist.</CoiStatement>
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